New viruses discovered in endangered wild Pacific salmon populations

September 4, 2019

Chinook salmon found dead at British Columbia spawning grounds (Kristi Miller-Saunders, Fisheries and Oceans Canada).

Three new viruses—including one from a group of viruses never before shown to infect fish—have been discovered in endangered Chinook and sockeye salmon populations.

While the impact of the viruses on salmon health isn’t yet known, all three are related to viruses that cause serious disease in other species.

“We were surprised to find viruses which had never before been shown to infect fish,” said Gideon Mordecai, researcher at UBC’s department of earth, ocean and atmospheric sciences. “Although there’s no risk to humans, one of the viruses is evolutionarily related to respiratory coronaviruses, and is localized to the gills. That suggests it has a similar infection strategy to its distant relatives that infect mammals.”

UBC and Fisheries and Oceans Canada researchers used DNA sequencing followed by tests specific to each virus  to screen more than 6,000 salmon from along the B.C. coast, including wild, hatchery and aquaculture fish.

“We found the new viruses widely distributed in dead and dying farmed salmon and in wild salmon,” said UBC virologist Curtis Suttle. “It emphasizes the potential role that viral disease may play in the population dynamics of wild fish stocks, and the threat that these viruses may pose to aquaculture.”

One new virus, detected more commonly in salmon hatcheries, infected more than 15 per cent of all hatchery Chinook tested.

Another new virus was detected in 20 per cent of Chinook from fish farms —but was only found in adult or sub-adult salmon. In general, the new viruses were more commonly found in cultured fish populations than in wild.

“It’s essential that we determine whether these viruses are important factors in the decline of Chinook and sockeye salmon stocks,” said Suttle. “The research highlights the need for robust surveillance to improve our understanding of how viruses might impact the health of wild Pacific salmon populations.”

Over the past 30 years, steady declines in Chinook and sockeye salmon populations have been of great concern to Indigenous peoples, commercial and recreational fishers, and the general public. While much of the focus has been on the impact of piscine orthoreovirus (PRV), the new findings highlight how little is known about other viruses endemic to salmon populations.

“Being able to screen so many fish for these viruses was an exciting breakthrough, and meant we were able to identify hotspots of infection,” adds Mordecai.

“One of the viruses was relatively common in juvenile migratory salmon as they enter the ocean—a period thought to be critical to their survival into adulthood.”

The work was funded as part of the Strategic Salmon Health Initiative, a partnership of Genome BC, Fisheries and Oceans Canada, and the Pacific Salmon Foundation.

 


For more information, contact…

Chris Balma

balma@science.ubc.ca
  • Bacteria + Viruses
  • Biodiversity
  • Zoology

Musqueam First Nation land acknowledegement

UBC Science acknowledges that the UBC Point Grey campus is situated on the traditional, ancestral, and unceded territory of the xʷməθkʷəy̓əm.

Learn more: Musqueam First Nation

Faculty of Science

Office of the Dean, Earth Sciences Building
2178–2207 Main Mall
Vancouver, BC Canada
V6T 1Z4
UBC Crest The official logo of the University of British Columbia. Urgent Message An exclamation mark in a speech bubble. Arrow An arrow indicating direction. Arrow in Circle An arrow indicating direction. A bookmark An ribbon to indicate a special marker. Calendar A calendar. Caret An arrowhead indicating direction. Time A clock. Chats Two speech clouds. External link An arrow pointing up and to the right. Facebook The logo for the Facebook social media service. A Facemask The medical facemask. Information The letter 'i' in a circle. Instagram The logo for the Instagram social media service. Linkedin The logo for the LinkedIn social media service. Lock, closed A closed padlock. Lock, open An open padlock. Location Pin A map location pin. Mail An envelope. Mask A protective face mask. Menu Three horizontal lines indicating a menu. Minus A minus sign. Money A money bill. Telephone An antique telephone. Plus A plus symbol indicating more or the ability to add. RSS Curved lines indicating information transfer. Search A magnifying glass. Arrow indicating share action A directional arrow. Twitter The logo for the Twitter social media service. Youtube The logo for the YouTube video sharing service.